Reading Contents Of File

hello,

i am trying to make a table from some files. i used this to record how much "RD_" field i have in my file. Quote:
grep -o 'RD_' $f|grep -c 'RD_'
forexample i got 5 "RD_" fields now i want to print 5 number of fields from another file starting from 2nd field. i did it mannully like Quote:
awk 'NR==1{print"{"$2","$3","$4","$5","$6","0.0000",""0.0000""}"","}' $file
i want to make it work together and a bit auto matic like PHP Code:
awk 'NR==1{print"{"$2"to "$5"," apend zeros to make it total 7 fields"}"","}' $file 


your coments would be apreciated
thanks alot

I want to And search grep shell

but It's hard to grep variable


---------------------------------------------------------------
#!/bin/bash


if [ $# -eq 0 ]
then
echo "Ussage: phone searchfor [...searchfor]"
echo "(You didn't tell me what you want to search for )"

else

pass=0
find=""

for idx in $*
do
if [ -n "$idx" ]
then
if [ $pass -eq 0 ]
then
find=$(egrep "$idx" mydata)
pass=1

else

find=$("$find" | grep "$idx")

echo $find
fi
fi

done

if [ -z "$find" ]
then
echo "There is no such thing"
else

echo $find | awk -f display.awk

fi

fi

-----------------------------------------------------

there is one error : command not found

in find=$("$find" | grep "$idx")

how can I grep variable and store it into variable?

Hello,

They gave me this:
Code:

#!/bin/bash

# Write error message on stderr and die
function die() {
  echo "$@" >&2
  exit 1
}

# Load var from properties files
function load() {
  for propertie in "$@" ; do
    [[ -f "${propertie}" ]] || die "load() : \"${propertie}\" don't exist !"
    while read ; do
echo "${REPLY%=*}"
echo "${REPLY#*=}"
      [[ -n "${REPLY%%=*}" && -z "${REPLY#*=}" ]] || die "load() : Variable \"${REPLY%%=*}\" is empty!"
      eval "${REPLY%%=*}"=\'"${REPLY#*=}"\'
    done < "${propertie}"
  done
}

load "manage_srcds.conf"
echo "SRCDS_TICKRATE=$SRCDS_TICKRATE"
echo "SRCDS_SCREEN=$SRCDS_SCREEN"
echo "SRCDS_SRCDS_GAME_NAME=$SRCDS_GAME_NAME"
echo "SRCDS_MAXPLAYERS=$SRCDS_MAXPLAYERS"

but, return:
Quote:
###################################################
###################################################
load() : Variable "###################################################" is empty!

cat manage_srcds.conf

I just wish that there was no empty variable excluding those who do not have integer.

Best regards,

Hi all,

I'm trying to identify files that do not have matches for certain strings. FYI, these are files of DNA sequences and I'm trying to find those that are NOT sampled for any species by my group of interest (e.g., genes that are specific to that group of organisms).

I tried this code but it's actually yielding a list of files that DO match for my regexp.
Code:

for FILENAME in *.fas
do
grep -q -L ">PBAH" $FILENAME && grep -q -L ">SKOW" $FILENAME && grep -q -L ">CGRA" $FILENAME && echo $FILENAME
done

Basically I want to somehow go through and file files that do not contain ">PBAH" ">SKOW" or ">CGRA". Any assistance would be greatly appreciated!

Best,
Kevin

hello all,

please help me with python ftplib. i was trying to copy files from my linux machine to a windows server using ftplib. everything was working good. but i'm only able to copy files from the same directory the script is. how do i copy files from a different directory? i always get "file not found error message". here's my code :

Code:

tester_name = str (socket.gethostname())
def upload(ftp, file):
    ext = os.path.splitext(file)[1]
    if ext in (".txt", ".htm", ".html"):
        ftp.storlines("STOR " + file, open(file))
    else:
        ftp.storbinary("STOR " + file, open(file, "rb"), 1024)



parse_source_path = ('/path/to/where/i/go/')
parse_source_file_list = os.listdir(parse_source_path)

ftp = ftplib.FTP("server_IP")
ftp.login("username", "pass")

folder_list = []

ftp.dir(folder_list.append)

if str(tester_name) not in str(folder_list) :
    ftp.mkd("%s"%tester_name)
    ftp.cwd("%s"%tester_name)
    for files in parse_source_file_list :
        print files
        upload(ftp, files)


else :
    print "later"

I have two files which has exact same number of lines.
I want first line of first file should be filename of new file and content of this new file should be first line of second file.
Then second line of first file should be filename of again new file and content of this new file should be second line of second file.
then third line of first file should be filename of again new file and content of this new file should be third line of second file.
and so on...
I am trying to do it using for loop but I am not able to create two for loops.
This is what I have done
Code:

IFS=$'\n'
var=$(sed 's/\"http\(.*\)\/\(.*\).wav\"\,\".*/\2/g' 1797.csv) # filenames of all files
var2=$(sed 's/\"http\(.*\)\/\(.*\).wav\"\,\"\(.*\)\"$/\3/g' 1797.csv) # contents of all files
for j in $var;
do
#Here I do not know how to use $var2
done

Please help.

Hi All,

Im trying to create a script which checks the creation time of a file and if it is more than ten minutes, send out an alert.

For ex : Creation date of file is 10:30 AM
current time is 10:45 AM

Then send an alert/ message.

This is the script i wrote below :

Code:

#!/bin/ksh

filename="/apps/log/file.txt"

if [ -f "${filename}" ]
then
        createTime=`ls -lad "${filename}" | awk '{print $8}'`
        echo "$createTime"
        currentTime=`date '+%M'`
        echo "$currentTime"
        DIFF=$(( $currentTime - $createTime )) 
        echo "$DIFF"

else

        exit 1

fi

I am getting syntax error on the subraction when i try to run this script . I can understand that creation time and current time is in different format thats y this error throws, but i dont know how to rectify it .

I need to find out if the file creation time is more than ten minutes.

Please help me in achieving this output.

I copied the following from my linux console.

grep -lr "SMTP" *.ini
grep: *.ini: No such file or directory

I wanted to search recursively under current location in files with extenstion .ini
Actually there are files that contain "SMTP" under this directory. But I got the above error message.
What is wrong? I am using centos 6.

Thanks,
3rock

I have an expect script to SSH to a remote host and obtain some user inputs and information about the server/network configuration. The responses are saved in a text file that I then need to copy to my local host so that I can read the lines into variables for use in the parent shell script.

Is there a way to do this without needing to enter the username and password for the local host to use function scp? I have tried the following in my expect script to no avail:
Code:

spawn scp $usr@$host:$flnm .
expect {
	-re "(.*)assword:" { 
		send -s "$pswd\r"
	}
}

I have also tried to directly scp the file and enter the username and password to try to debug the issue, and that doesn't work either:
Code:

spawn scp file.txt user@host:file.txt
expect {
	-re "(.*)assword:" {
		send -s "password\r"
	}
	"you sure you want to continue connecting" {
		send -s "yes\r"
		exp_continue
	}
}

In both scenarios I have used exp_internal 1, and there are no errors. But I do not end up with the file on my local host.

Following the copy, I would like to delete the file from the remote host. Any suggestions on how to accomplish this?

Hello,
I'm working on a shell script that needs to read the a file (file1) a batch (read 2000 lines at a time) and then write those lines to seperate file which I'm using to run ldapmodify command. I need to check some other file size and once this file less than 200kb, i would need to run second batch and so on until file1 is empty.
Quote:
#!/bin/bash
set -x
filesize=200
server=10.11.xxx.xx
filename=fileimport.txt
taofile1=687686.txt
taofile=/var/opt/$taofile1

stty -echo
echo -n "Enter password: "
read passwd
stty echo
context="cn=user1,ou=org1,ou=org2,o=org"
if [[ -s "$filename" ]];then
for lines in $filename
do
head -99997 fileimport.txt >> ldapreadd.ldif && sed -i '1,+99996d' fileimport.txt
if [ -s ldapreadd.ldif ];then
ldapmodify -h $server -p 389 -D $context -w $passwd -v -x -f ldapreadd.ldif &> /dev/null
echo "LDIF script is running. Please wait..."
sleep 60
if [ -f "$taofile" ];then
taofilesize=`stat -c %s ${taofile}`
# if [ "$taofilesize" -ge 200 ];then
while [ `stat -c %s ${taofile}` -ge 200 ]
do
echo " Driver is processing LDIF file. Please wait..."
sleep 60
done
fi
rm -rf ldapreadd.ldif
fi
done
else
echo "$filename file is empty. Exiting script..."
exit
fi

I have 2 issues here. first one script is not reading exact lines as specified. Some times its reading more lines some times less lines. Second issues once it run the first batch, script is exiting. Please advise.